Pubblications (2002-2010):
Concettina Guerra

G. Ciriello, C. Gallina, C. Guerra (2010). Analysis of interactions between ribosomal proteins and RNA structural motifs. BMC BIOINFORMATICS, vol. 11 (Suppl 1):S41, ISSN: 1471-2105

M. Comin, F. Dellaert, C. Guerra (2009).
Binding Balls: Fast detection of Binding Sites using a property of Spherical Fourier Transform.
Journal of Computational Biology , 16, 11.

S. Angaran, M.E. Bock, C. Garutti and C. Guerra (2009)
MolLoc: a web tool for the local structural alignment of molecular surfaces.
Nucleic Acids Research , Web Server Issue, doi: 10.1093/nar/gkp405.

A. Apostolico,  G. Ciriello, C. Guerra,  C. Heitsch, C. Hsiao, L. Williams (2009). 
Finding 3D Motifs in Ribosomal RNA Structures,
Nucleic Acids Research, doi: 10.1093/nar/gkn1044.

C. Guerra (2009). A comparative assessment of methods for recognition of binding sites

in proteins. In: 4th Int. Moscow Conf. on Computational Molecular Biology, Moscow.

P. Bertolazzi, G. Liuzzi, C. Guerra (2009). A global Optimization approach to protein

surface alignment. In: Proc. of CWS, Washington, USA.

M. Comin, C. Guerra, G. Zanotti, (2008).
Mining Over-Represented 3D Patterns of Secondary Structures in Proteins,
Journal of Bioinformatics and Computational Biology, 6, 6; p. 1067-1087.

A. Apostolico, G. Ciriello, C. Guerra, C. Heitsch (2008)
Discovering 3D motifs in RNA, in
"Biological data mining", Chapman & Hall/CRC Press, (invited).

M. Comin, C. Guerra,  G. Zanotti (2008)
Invariant geometric properties of secondary structure elements in proteins,
in "Biological data mining", Chapman & Hall/CRC Press, (invited).

M.E. Bock, C. Garutti and C. Guerra (2008).
Cavity detection and matching for binding site recognition,
Theoretical Computer Science, doi:10.1016/j.tcs.2008.08.018

G. Ciriello, C. Guerra (2008)
A Review on Models and Algorithms for Motif Discovery in Protein-Protein Interaction Network,
Briefings in Functional Genomics and Proteomics, DOI 10.1093/bfgp/eln015, April 2008.

M.E. Bock, C. Garutti and C. Guerra (2007).
Discovery of Similar Regions on Protein Surfaces,
Journal of Computational Biology, 14, 3, pp. 285-299, 2007.

G. Ciriello, M. Comin and C. Guerra (2007).
Algorithmic Re-Structuring and Data Replication for Protein Structure Comparison on a GRID,
Future Generation Computer Systems, 23, 3, pp. 391-397.

M.E. Bock, C. Garutti and C. Guerra (2007).
Effective Labeling of Molecular Surface Points to Matching Cavities and Locate Putative Binding Sites.
Proc. Computational Systems Bioinformatics, San Diego, 2007.

M. Comin, C. Guerra and G. Zanotti (2007)
Mining Over-Represented 3D Patterns of Secondary Structures in Proteins, Proc. BioKDD, San Jose.

A. Apostolico, C. Guerra, S. Istrail, P. Pevzner, M. Waterman (Eds.) (2006).
Research in Computational Molecular Biology, RECOMB 2006, Springer-Verlag.

C. Guerra, V. Pascucci (2005).
Line-based object recognition using Hausdorff distance: from range images to molecular secondary structure,
Image and Vision Computing, 23, 4, pp. 405-415.

M. E. Bock, G. M. Cortelazzo, C. Ferrari, and C. Guerra (2005). 
Identifying similar surface patches on proteins using a spin-image surface representation,
Proc. Combinatorial Pattern Matching, (CPM2005), Korea.

M. Comin, C.Guerra, G. Zanotti (2004).
PROuST: a Comparison Method of Three-Dimensional Structures of
Proteins using Indexing Techniques. Journal of Computational Biology, 11, 6, pp. 1061-1072, 2004.

G. M. Cortelazzo, C. Guerra. co-editors (2004).
Special Issue  on  "Model-based and Image-based 3D Scene Representation
for Interactive Visualization",  Computer Vision and Image Understanding,  96, 3,  2004.

M. Comin, C. Ferrari, C. Guerra  (2004).
Grid deployment of bioinformatics applications: a case study in protein similarity determination
Parallel Processing Letters, 14, 2, pp. 163-176, 2004.

Daniel E. Platt, Concettina Guerra, Giuseppe Zanotti, and Isidore Rigoutsos (2003). 
Global Secondary Structure Packing Angle Bias in Proteins.
In Proteins: Structure, Function and Genetics, vol. 53, pp. 252-261, 2003. 

Carlo Ferrari, Concettina Guerra and G. Zanotti (2003). 
A Grid-aware approach to protein structure comparison.
Journal of Parallel and Distributed Computing,  Special Issue on "High Performance Computational Biology",
vol. 63, pp. 728-737. 

S. Istrail , C. Guerra, eds.  (2003). 
Mathematical Methods for Protein Structure Analysis and Design.
Lecture Notes on Bionformatics, Springer-Verlag.

Giuseppe Zanotti, Concettina Guerra (2002).
Hypothesis: Is tensegrity a unifying concept of protein folds?
FEBS Letters, 26897, pp. 1-4, 2002. 

Mary E. Bock, Concettina Guerra.  (2002) Range Image segmentation on a Cluster.
Proc. 9th Int. Conf. on High Performance Computing, Bangalore, India,  pp. 313-322.